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The Digimon Mini is modeled similarly to the original pets but at a much smaller size. The character set has been minimized and functions are limited. For example, there is no status screen to view how hungry the character is. The player must simply feed it when it's hungry. Many feel the Minis are a lot harder to kill than the other pets.

The Mini also uses the new three-prong connector, which leaves it connectable to the Pendulum X, Digimon Accelerator, and new Digimon iC. The third Mini updates the character roster, expanding the available Digimon from 13 to 18.

Version 1

• Fresh: Botamon
• In-Training: Koromon
• Rookie: Agumon, Betamon, Gabumon
• Champion: Greymon, Seadramon, Garurumon, Numemon
• Ultimate: MetalGreymon, Triceramon
• Mega: WarGreymon
• Level 7: Omnimon

Version 2

• Fresh: Pabumon
• In-Training: Motimon
• Rookie: Tentomon, Elecmon, Kunemon
• Champion: Kabuterimon, Centarumon, Tyrannomon, Sukamon
• Ultimate: MegaKabuterimon, WaruMonzaemon
• Mega: HerculesKabuterimon
• Level 7: TyrantKabuterimon

Version 3

• Fresh: Poyomon
• In-Training: Tokomon
• Rookie: Patamon, DemiDevimon, Crabmon
• Champion: Angemon, Devimon, Coelamon, Shellmon, Leomon, Nanimon
• Ultimate: MagnaAngemon, Myotismon, Etemon
• Mega: Magnadramon, Piedmon, BantyoLeomon
• Level 7: Lucemon Shadow Lord Mode